IL_6ZVJ_013

3D structure

PDB id

6ZVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6ZVJ|1|2|C|142, 6ZVJ|1|2|U|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVJ|1|2|G|130
6ZVJ|1|2|U|140
6ZVJ|1|2|A|141
6ZVJ|1|2|C|142
6ZVJ|1|2|U|143
6ZVJ|1|2|U|144
*
6ZVJ|1|2|A|175
6ZVJ|1|2|U|176
6ZVJ|1|2|G|177
6ZVJ|1|2|C|178
6ZVJ|1|2|C|179
6ZVJ|1|2|G|180
6ZVJ|1|2|A|181
6ZVJ|1|2|C|182

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain r

40S ribosomal protein S6