IL_6ZVJ_017

3D structure

PDB id

6ZVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

6ZVJ|1|2|U|305, 6ZVJ|1|2|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVJ|1|2|C|216
6ZVJ|1|2|A|217
6ZVJ|1|2|U|218
6ZVJ|1|2|U|219
*
6ZVJ|1|2|A|302
6ZVJ|1|2|C|303
6ZVJ|1|2|C|304
6ZVJ|1|2|U|305
6ZVJ|1|2|C|306
6ZVJ|1|2|G|307
6ZVJ|1|2|G|308
6ZVJ|1|2|G|309

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain q

40S ribosomal protein S4, X isoform

Chain t

40S ribosomal protein S8