IL_6ZVJ_072

3D structure

PDB id

6ZVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AACUAG*CUUCUU

Length

12 nucleotides

Bulged bases

6ZVJ|1|2|C|1403, 6ZVJ|1|2|U|1404

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVJ|1|2|A|1401
6ZVJ|1|2|A|1402
6ZVJ|1|2|C|1403
6ZVJ|1|2|U|1404
6ZVJ|1|2|A|1405
6ZVJ|1|2|G|1406
*
6ZVJ|1|2|C|1440
6ZVJ|1|2|U|1441
6ZVJ|1|2|U|1442
6ZVJ|1|2|C|1443
6ZVJ|1|2|U|1444
6ZVJ|1|2|U|1445

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain V

Receptor of activated protein C kinase 1

Chain g

40S ribosomal protein S16

Chain h

40S ribosomal protein S20