IL_6ZVJ_081

3D structure

PDB id

6ZVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGCUAC*GUAAAAG

Length

13 nucleotides

Bulged bases

6ZVJ|1|2|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVJ|1|2|C|1708
6ZVJ|1|2|G|1709
6ZVJ|1|2|C|1710
6ZVJ|1|2|U|1711
6ZVJ|1|2|A|1712
6ZVJ|1|2|C|1713
*
6ZVJ|1|2|G|1820
6ZVJ|1|2|U|1821
6ZVJ|1|2|A|1822
6ZVJ|1|2|A|1823
6ZVJ|1|2|A|1824
6ZVJ|1|2|A|1825
6ZVJ|1|2|G|1826

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain 1

ATP-binding cassette sub-family E member 1

Chain N

Eukaryotic translation initiation factor 1

Chain W

60S ribosomal protein L41

Chain j

40S ribosomal protein S23