IL_6ZVJ_099

3D structure

PDB id

6ZVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUGGAUGGU*ACUAUCUA

Length

17 nucleotides

Bulged bases

6ZVJ|1|2|U|1721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZVJ|1|2|U|1720
6ZVJ|1|2|U|1721
6ZVJ|1|2|G|1722
6ZVJ|1|2|G|1723
6ZVJ|1|2|A|1724
6ZVJ|1|2|U|1725
6ZVJ|1|2|G|1726
6ZVJ|1|2|G|1727
6ZVJ|1|2|U|1728
*
6ZVJ|1|2|A|1806
6ZVJ|1|2|C|1807
6ZVJ|1|2|U|1808
6ZVJ|1|2|A|1809
6ZVJ|1|2|U|1810
6ZVJ|1|2|C|1811
6ZVJ|1|2|U|1812
6ZVJ|1|2|A|1813

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain 1

ATP-binding cassette sub-family E member 1

Chain W

60S ribosomal protein L41

Chain j

40S ribosomal protein S23

Chain t

40S ribosomal protein S8