IL_6ZVK_154
3D structure
- PDB id
- 6ZVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- GUCUUG*UCAAC
- Length
- 11 nucleotides
- Bulged bases
- 6ZVK|1|e2|U|1754
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZVK|1|e2|G|1753
6ZVK|1|e2|U|1754
6ZVK|1|e2|C|1755
6ZVK|1|e2|U|1756
6ZVK|1|e2|U|1757
6ZVK|1|e2|G|1758
*
6ZVK|1|e2|U|1773
6ZVK|1|e2|C|1774
6ZVK|1|e2|A|1775
6ZVK|1|e2|A|1776
6ZVK|1|e2|C|1777
Current chains
- Chain e2
- 28S RIBOSOMAL RNA
Nearby chains
- Chain G2
- 60S ribosomal protein L5
- Chain L2
- Ribosomal protein L10 (Predicted)
Coloring options: