IL_6ZXD_013

3D structure

PDB id

6ZXD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6ZXD|1|2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXD|1|2|G|130
6ZXD|1|2|U|140
6ZXD|1|2|A|141
6ZXD|1|2|C|142
6ZXD|1|2|U|143
6ZXD|1|2|U|144
*
6ZXD|1|2|A|175
6ZXD|1|2|U|176
6ZXD|1|2|G|177
6ZXD|1|2|C|178
6ZXD|1|2|C|179
6ZXD|1|2|G|180
6ZXD|1|2|A|181
6ZXD|1|2|C|182

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6