IL_6ZXF_012

3D structure

PDB id

6ZXF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6ZXF|1|2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXF|1|2|G|130
6ZXF|1|2|U|140
6ZXF|1|2|A|141
6ZXF|1|2|C|142
6ZXF|1|2|U|143
6ZXF|1|2|U|144
*
6ZXF|1|2|A|175
6ZXF|1|2|U|176
6ZXF|1|2|G|177
6ZXF|1|2|C|178
6ZXF|1|2|C|179
6ZXF|1|2|G|180
6ZXF|1|2|A|181
6ZXF|1|2|C|182

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6