IL_6ZXF_096

3D structure

PDB id

6ZXF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAGUAUGG*CUGAAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXF|1|2|G|1168
6ZXF|1|2|G|1169
6ZXF|1|2|A|1170
6ZXF|1|2|G|1171
6ZXF|1|2|U|1172
6ZXF|1|2|A|1173
6ZXF|1|2|U|1174
6ZXF|1|2|G|1175
6ZXF|1|2|G|1176
*
6ZXF|1|2|C|1185
6ZXF|1|2|U|1186
6ZXF|1|2|G|1187
6ZXF|1|2|A|1188
6ZXF|1|2|A|1189
6ZXF|1|2|A|1190
6ZXF|1|2|C|1191

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain X

40S ribosomal protein S23

Chain z

Serine/threonine-protein kinase RIO1