IL_6ZXG_012

3D structure

PDB id

6ZXG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

U(OMU)CC(PSU)U(OMU)G*CAUUCGA

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXG|1|2|U|115
6ZXG|1|2|OMU|116
6ZXG|1|2|C|117
6ZXG|1|2|C|118
6ZXG|1|2|PSU|119
6ZXG|1|2|U|120
6ZXG|1|2|OMU|121
6ZXG|1|2|G|122
*
6ZXG|1|2|C|342
6ZXG|1|2|A|343
6ZXG|1|2|U|344
6ZXG|1|2|U|345
6ZXG|1|2|C|346
6ZXG|1|2|G|347
6ZXG|1|2|A|348

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain I

40S ribosomal protein S8