IL_6ZXH_014

3D structure

PDB id

6ZXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6ZXH|1|2|C|142, 6ZXH|1|2|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXH|1|2|G|130
6ZXH|1|2|U|140
6ZXH|1|2|A|141
6ZXH|1|2|C|142
6ZXH|1|2|U|143
6ZXH|1|2|U|144
*
6ZXH|1|2|A|175
6ZXH|1|2|U|176
6ZXH|1|2|G|177
6ZXH|1|2|C|178
6ZXH|1|2|C|179
6ZXH|1|2|G|180
6ZXH|1|2|A|181
6ZXH|1|2|C|182

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6