IL_6ZXH_018

3D structure

PDB id

6ZXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CA(PSU)U*ACCUCGGG

Length

12 nucleotides

Bulged bases

6ZXH|1|2|U|305, 6ZXH|1|2|G|307

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXH|1|2|C|216
6ZXH|1|2|A|217
6ZXH|1|2|PSU|218
6ZXH|1|2|U|219
*
6ZXH|1|2|A|302
6ZXH|1|2|C|303
6ZXH|1|2|C|304
6ZXH|1|2|U|305
6ZXH|1|2|C|306
6ZXH|1|2|G|307
6ZXH|1|2|G|308
6ZXH|1|2|G|309

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain I

40S ribosomal protein S8