IL_6ZXH_031
3D structure
- PDB id
- 6ZXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAG*CGAGGAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZXH_031 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.1822
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
6ZXH|1|2|G|563
6ZXH|1|2|A|564
6ZXH|1|2|G|565
*
6ZXH|1|2|C|585
6ZXH|1|2|G|586
6ZXH|1|2|A|587
6ZXH|1|2|G|588
6ZXH|1|2|G|589
6ZXH|1|2|A|590
6ZXH|1|2|U|591
6ZXH|1|2|C|592
Current chains
- Chain 2
- pre-18S ribosomal RNA
Nearby chains
- Chain J
- 40S ribosomal protein S9
- Chain e
- 40S ribosomal protein S30
Coloring options: