IL_6ZXH_044

3D structure

PDB id

6ZXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)A*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXH|1|2|G|807
6ZXH|1|2|A|808
6ZXH|1|2|A|809
6ZXH|1|2|A|810
6ZXH|1|2|A|811
6ZXH|1|2|A|812
6ZXH|1|2|A|813
6ZXH|1|2|PSU|814
6ZXH|1|2|PSU|815
6ZXH|1|2|A|816
*
6ZXH|1|2|U|848
6ZXH|1|2|A|849
6ZXH|1|2|C|850
6ZXH|1|2|C|851
6ZXH|1|2|G|852
6ZXH|1|2|C|853
6ZXH|1|2|A|854
6ZXH|1|2|G|855
6ZXH|1|2|C|856

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain J

40S ribosomal protein S9

Chain L

40S ribosomal protein S11

Chain W

40S ribosomal protein S15a