IL_6ZXH_053

3D structure

PDB id

6ZXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAGG(PSU)(PSU)C*GUUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXH|1|2|G|1041
6ZXH|1|2|A|1042
6ZXH|1|2|G|1043
6ZXH|1|2|G|1044
6ZXH|1|2|PSU|1045
6ZXH|1|2|PSU|1046
6ZXH|1|2|C|1047
*
6ZXH|1|2|G|1071
6ZXH|1|2|U|1072
6ZXH|1|2|U|1073
6ZXH|1|2|C|1074

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain N

40S ribosomal protein S13

Chain O

40S ribosomal protein S14

Chain h

40S ribosomal protein S26

Chain z

Serine/threonine-protein kinase RIO1