IL_6ZYM_008
3D structure
- PDB id
- 6ZYM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human C Complex Spliceosome - High-resolution CORE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGGUUUC*GGAACAACUCUG
- Length
- 20 nucleotides
- Bulged bases
- 6ZYM|1|5|A|70
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZYM|1|5|C|6
6ZYM|1|5|U|7
6ZYM|1|5|G|8
6ZYM|1|5|G|9
6ZYM|1|5|U|10
6ZYM|1|5|U|11
6ZYM|1|5|U|12
6ZYM|1|5|C|13
*
6ZYM|1|5|G|64
6ZYM|1|5|G|65
6ZYM|1|5|A|66
6ZYM|1|5|A|67
6ZYM|1|5|C|68
6ZYM|1|5|A|69
6ZYM|1|5|A|70
6ZYM|1|5|C|71
6ZYM|1|5|U|72
6ZYM|1|5|C|73
6ZYM|1|5|U|74
6ZYM|1|5|G|75
Current chains
- Chain 5
- U5 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain B
- 116 kDa U5 small nuclear ribonucleoprotein component
- Chain F
- U5 small nuclear ribonucleoprotein 40 kDa protein
- Chain Q
- Protein BUD31 homolog
Coloring options: