IL_7A01_045
3D structure
- PDB id
- 7A01 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGCCGGGG*CAAGAAU
- Length
- 15 nucleotides
- Bulged bases
- 7A01|1|K3|G|933
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7A01|1|K3|G|928
7A01|1|K3|G|929
7A01|1|K3|C|930
7A01|1|K3|C|931
7A01|1|K3|G|932
7A01|1|K3|G|933
7A01|1|K3|G|934
7A01|1|K3|G|935
*
7A01|1|K3|C|1007
7A01|1|K3|A|1008
7A01|1|K3|A|1009
7A01|1|K3|G|1010
7A01|1|K3|A|1011
7A01|1|K3|A|1012
7A01|1|K3|U|1013
Current chains
- Chain K3
- 18S RIBOSOMAL RNA
Nearby chains
- Chain 13
- Ribosomal protein L30
- Chain F3
- ribosomal protein uS15
- Chain L3
- 40S ribosomal protein S27
- Chain O3
- 40S RIBOSOMAL PROTEIN ES26
- Chain V3
- 40S ribosomal protein S3a
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