IL_7A01_088
3D structure
- PDB id
- 7A01 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAACGCG*CUAAGC
- Length
- 13 nucleotides
- Bulged bases
- 7A01|1|d2|A|22
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7A01|1|d2|G|21
7A01|1|d2|A|22
7A01|1|d2|A|23
7A01|1|d2|C|24
7A01|1|d2|G|25
7A01|1|d2|C|26
7A01|1|d2|G|27
*
7A01|1|d2|C|52
7A01|1|d2|U|53
7A01|1|d2|A|54
7A01|1|d2|A|55
7A01|1|d2|G|56
7A01|1|d2|C|57
Current chains
- Chain d2
- 5S RIBOSOMAL RNA
Nearby chains
- Chain G2
- 60S ribosomal protein L5
- Chain Y2
- Ribosomal protein L11
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