IL_7A09_027
3D structure
- PDB id
- 7A09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human ABCE1-bound 43S pre-initiation complex - State III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUA*UA
- Length
- 5 nucleotides
- Bulged bases
- 7A09|1|2|U|488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A09_027 not in the Motif Atlas
- Geometric match to IL_4LFB_014
- Geometric discrepancy: 0.2114
- The information below is about IL_4LFB_014
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 129
Unit IDs
7A09|1|2|U|487
7A09|1|2|U|488
7A09|1|2|A|489
*
7A09|1|2|U|511
7A09|1|2|A|512
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain J
- ATP-binding cassette sub-family E member 1
- Chain c
- 40S ribosomal protein S9
- Chain q
- 40S ribosomal protein S4, X isoform
- Chain z
- 40S ribosomal protein S24
Coloring options: