IL_7A09_068
3D structure
- PDB id
- 7A09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human ABCE1-bound 43S pre-initiation complex - State III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 7A09|1|2|C|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A09_068 not in the Motif Atlas
- Homologous match to IL_4V88_450
- Geometric discrepancy: 0.3253
- The information below is about IL_4V88_450
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.2
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7A09|1|2|U|1329
7A09|1|2|G|1330
7A09|1|2|C|1331
7A09|1|2|A|1332
7A09|1|2|U|1333
*
7A09|1|2|A|1498
7A09|1|2|U|1499
7A09|1|2|G|1500
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain b
- 40S ribosomal protein S3
- Chain h
- 40S ribosomal protein S20
- Chain l
- 40S ribosomal protein S29
- Chain u
- 40S ribosomal protein S10
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