IL_7A09_077

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

7A09|1|2|A|1580, 7A09|1|2|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A09|1|2|G|1550
7A09|1|2|U|1551
7A09|1|2|G|1552
7A09|1|2|C|1553
7A09|1|2|C|1554
7A09|1|2|U|1555
7A09|1|2|A|1556
7A09|1|2|C|1557
7A09|1|2|C|1558
*
7A09|1|2|G|1577
7A09|1|2|U|1578
7A09|1|2|A|1579
7A09|1|2|A|1580
7A09|1|2|C|1581
7A09|1|2|C|1582

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain b

40S ribosomal protein S3

Chain h

40S ribosomal protein S20

Chain l

40S ribosomal protein S29

Chain u

40S ribosomal protein S10