IL_7A09_098

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAGUUAAAA*UCCG

Length

13 nucleotides

Bulged bases

7A09|1|2|A|668

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A09|1|2|C|663
7A09|1|2|A|664
7A09|1|2|G|665
7A09|1|2|U|666
7A09|1|2|U|667
7A09|1|2|A|668
7A09|1|2|A|669
7A09|1|2|A|670
7A09|1|2|A|671
*
7A09|1|2|U|1161
7A09|1|2|C|1162
7A09|1|2|C|1163
7A09|1|2|G|1164

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain Q

40S ribosomal protein S26

Chain d

40S ribosomal protein S2

Chain j

40S ribosomal protein S23