IL_7A09_099
3D structure
- PDB id
- 7A09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human ABCE1-bound 43S pre-initiation complex - State III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UCGUAG*UCAAGA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A09_099 not in the Motif Atlas
- Geometric match to IL_3LQX_002
- Geometric discrepancy: 0.3433
- The information below is about IL_3LQX_002
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_35186.2
- Basepair signature
- cWW-tSH-tHW-L-R-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7A09|1|2|U|675
7A09|1|2|C|676
7A09|1|2|G|677
7A09|1|2|U|678
7A09|1|2|A|679
7A09|1|2|G|680
*
7A09|1|2|U|1025
7A09|1|2|C|1026
7A09|1|2|A|1027
7A09|1|2|A|1028
7A09|1|2|G|1029
7A09|1|2|A|1030
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C
- Eukaryotic translation initiation factor 3 subunit C,Eukaryotic translation initiation factor 3 subunit C,Eukaryotic translation initiation factor 3 subunit C
- Chain D
- 40S ribosomal protein S15a
- Chain j
- 40S ribosomal protein S23
- Chain m
- 40S ribosomal protein S13
- Chain n
- 40S ribosomal protein S11
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