IL_7A09_102

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAAAAAUUA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A09|1|2|G|807
7A09|1|2|A|808
7A09|1|2|A|809
7A09|1|2|A|810
7A09|1|2|A|811
7A09|1|2|A|812
7A09|1|2|A|813
7A09|1|2|U|814
7A09|1|2|U|815
7A09|1|2|A|816
*
7A09|1|2|U|848
7A09|1|2|A|849
7A09|1|2|C|850
7A09|1|2|C|851
7A09|1|2|G|852
7A09|1|2|C|853
7A09|1|2|A|854
7A09|1|2|G|855
7A09|1|2|C|856

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D

40S ribosomal protein S15a

Chain c

40S ribosomal protein S9

Chain n

40S ribosomal protein S11

Chain q

40S ribosomal protein S4, X isoform