IL_7A09_110

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAUGCUA*UAGAGG

Length

13 nucleotides

Bulged bases

7A09|1|2|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A09|1|2|C|1395
7A09|1|2|A|1396
7A09|1|2|U|1397
7A09|1|2|G|1398
7A09|1|2|C|1399
7A09|1|2|U|1400
7A09|1|2|A|1401
*
7A09|1|2|U|1445
7A09|1|2|A|1446
7A09|1|2|G|1447
7A09|1|2|A|1448
7A09|1|2|G|1449
7A09|1|2|G|1450

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain V

Receptor of activated protein C kinase 1

Chain g

40S ribosomal protein S16

Chain h

40S ribosomal protein S20

Chain w

40S ribosomal protein S17