IL_7A0S_001

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GUGGAUG*CUGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_04021.2

Basepair signature

cWW-L-R-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|G|24
7A0S|1|X|U|25
7A0S|1|X|G|26
7A0S|1|X|G|27
7A0S|1|X|A|28
7A0S|1|X|U|29
7A0S|1|X|G|30
*
7A0S|1|X|C|520
7A0S|1|X|U|521
7A0S|1|X|G|522
7A0S|1|X|A|523
7A0S|1|X|A|524
7A0S|1|X|A|525
7A0S|1|X|C|526

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain N

50S ribosomal protein L20

Chain P

50S ribosomal protein L22

Chain Z

50S ribosomal protein L32