IL_7A0S_006
3D structure
- PDB id
- 7A0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S Deinococcus radiodurans ribosome bounded with mycinamicin I
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.22 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7A0S|1|X|G|165
7A0S|1|X|G|166
7A0S|1|X|A|167
7A0S|1|X|A|168
7A0S|1|X|C|169
7A0S|1|X|U|170
7A0S|1|X|G|171
*
7A0S|1|X|C|178
7A0S|1|X|U|179
7A0S|1|X|C|180
7A0S|1|X|A|181
7A0S|1|X|G|182
7A0S|1|X|U|183
7A0S|1|X|A|184
7A0S|1|X|C|185
Current chains
- Chain X
- RNA (2732-MER)
Nearby chains
- Chain I
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L28
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