IL_7A0S_008

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CAAG*CGAACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05192.4

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

7A0S|1|X|C|303
7A0S|1|X|A|304
7A0S|1|X|A|305
7A0S|1|X|G|306
*
7A0S|1|X|C|354
7A0S|1|X|G|355
7A0S|1|X|A|356
7A0S|1|X|A|357
7A0S|1|X|C|358
7A0S|1|X|G|359

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain R

50S ribosomal protein L24