IL_7A0S_015

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

7A0S|1|X|G|814, 7A0S|1|X|G|818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tHW-tHW cross-strand stack

Broad Annotation

No text annotation

Motif group

IL_54041.2

Basepair signature

cWW-L-R-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|G|687
7A0S|1|X|A|688
7A0S|1|X|A|689
7A0S|1|X|A|690
7A0S|1|X|C|691
*
7A0S|1|X|G|812
7A0S|1|X|A|813
7A0S|1|X|G|814
7A0S|1|X|A|815
7A0S|1|X|U|816
7A0S|1|X|A|817
7A0S|1|X|G|818
7A0S|1|X|C|819

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain C

50S ribosomal protein L4

Chain I

50S ribosomal protein L15