IL_7A0S_018

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UGAAAC*GCGGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_06136.2

Basepair signature

cWW-tHS-cWW-tHS-tSH-tSH-cWW

Number of instances in this motif group

6

Unit IDs

7A0S|1|X|U|716
7A0S|1|X|G|717
7A0S|1|X|A|718
7A0S|1|X|A|719
7A0S|1|X|A|720
7A0S|1|X|C|721
*
7A0S|1|X|G|736
7A0S|1|X|C|737
7A0S|1|X|G|738
7A0S|1|X|G|739
7A0S|1|X|A|740
7A0S|1|X|G|741

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2