IL_7A0S_033

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

7A0S|1|X|A|1167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7A0S|1|X|C|1009
7A0S|1|X|U|1010
7A0S|1|X|A|1011
7A0S|1|X|A|1012
7A0S|1|X|G|1013
*
7A0S|1|X|C|1164
7A0S|1|X|G|1165
7A0S|1|X|A|1166
7A0S|1|X|A|1167
7A0S|1|X|G|1168

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain N

50S ribosomal protein L20

Chain O

50S ribosomal protein L21

Chain W

50S ribosomal protein L30

Chain Y

5S ribosomal RNA; 5S rRNA