IL_7A0S_034

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UCCCUAAA*UA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

SSU/LSU pseudoknot

Broad Annotation

No text annotation

Motif group

IL_41203.4

Basepair signature

cWW-L-cWW-L-L-R-cSH

Number of instances in this motif group

11

Unit IDs

7A0S|1|X|U|1015
7A0S|1|X|C|1016
7A0S|1|X|C|1017
7A0S|1|X|C|1018
7A0S|1|X|U|1019
7A0S|1|X|A|1020
7A0S|1|X|A|1021
7A0S|1|X|A|1022
*
7A0S|1|X|U|1161
7A0S|1|X|A|1162

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain G

50S ribosomal protein L13

Chain N

50S ribosomal protein L20