IL_7A0S_036

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CUCAGUG*CUCAAG

Length

13 nucleotides

Bulged bases

7A0S|1|X|C|1152, 7A0S|1|X|A|1154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7A0S|1|X|C|1029
7A0S|1|X|U|1030
7A0S|1|X|C|1031
7A0S|1|X|A|1032
7A0S|1|X|G|1033
7A0S|1|X|U|1034
7A0S|1|X|G|1035
*
7A0S|1|X|C|1150
7A0S|1|X|U|1151
7A0S|1|X|C|1152
7A0S|1|X|A|1153
7A0S|1|X|A|1154
7A0S|1|X|G|1155

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain E

50S ribosomal protein L6

Chain G

50S ribosomal protein L13