IL_7A0S_039

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GUUGG*CACCC

Length

10 nucleotides

Bulged bases

7A0S|1|X|U|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_16218.2

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

7A0S|1|X|G|1070
7A0S|1|X|U|1071
7A0S|1|X|U|1072
7A0S|1|X|G|1073
7A0S|1|X|G|1074
*
7A0S|1|X|C|1087
7A0S|1|X|A|1088
7A0S|1|X|C|1089
7A0S|1|X|C|1090
7A0S|1|X|C|1091

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain J

50S ribosomal protein L16

Chain S

50S ribosomal protein L25