IL_7A0S_049

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UGAGG*CGCAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7A0S|1|X|U|1370
7A0S|1|X|G|1371
7A0S|1|X|A|1372
7A0S|1|X|G|1373
7A0S|1|X|G|1374
*
7A0S|1|X|C|1383
7A0S|1|X|G|1384
7A0S|1|X|C|1385
7A0S|1|X|A|1386
7A0S|1|X|G|1387

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain 2

50S ribosomal protein L34

Chain A

50S ribosomal protein L2