IL_7A0S_063

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CGUAAC*GAAGAAG

Length

13 nucleotides

Bulged bases

7A0S|1|X|G|1716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|C|1703
7A0S|1|X|G|1704
7A0S|1|X|U|1705
7A0S|1|X|A|1706
7A0S|1|X|A|1707
7A0S|1|X|C|1708
*
7A0S|1|X|G|1713
7A0S|1|X|A|1714
7A0S|1|X|A|1715
7A0S|1|X|G|1716
7A0S|1|X|A|1717
7A0S|1|X|A|1718
7A0S|1|X|G|1719

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2