IL_7A0S_070

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UGGAG*CGAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7A0S|1|X|U|1848
7A0S|1|X|G|1849
7A0S|1|X|G|1850
7A0S|1|X|A|1851
7A0S|1|X|G|1852
*
7A0S|1|X|C|1865
7A0S|1|X|G|1866
7A0S|1|X|A|1867
7A0S|1|X|A|1868
7A0S|1|X|A|1869

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain U

50S ribosomal protein L28