IL_7A0S_098

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GAUAAC*GGAAGC

Length

12 nucleotides

Bulged bases

7A0S|1|X|A|2745

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7A0S|1|X|G|2717
7A0S|1|X|A|2718
7A0S|1|X|U|2719
7A0S|1|X|A|2720
7A0S|1|X|A|2721
7A0S|1|X|C|2722
*
7A0S|1|X|G|2742
7A0S|1|X|G|2743
7A0S|1|X|A|2744
7A0S|1|X|A|2745
7A0S|1|X|G|2746
7A0S|1|X|C|2747

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain E

50S ribosomal protein L6

Chain G

50S ribosomal protein L13