IL_7A1G_034
3D structure
- PDB id
- 7A1G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUC*GC
- Length
- 5 nucleotides
- Bulged bases
- 7A1G|1|2|U|558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A1G_034 not in the Motif Atlas
- Geometric match to IL_4WF9_030
- Geometric discrepancy: 0.35
- The information below is about IL_4WF9_030
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
7A1G|1|2|G|557
7A1G|1|2|U|558
7A1G|1|2|C|559
*
7A1G|1|2|G|586
7A1G|1|2|C|587
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain A
- 40S ribosomal protein S3
- Chain c
- 40S ribosomal protein S23-A
- Chain g
- 40S ribosomal protein S30-A
- Chain z
- Eukaryotic translation initiation factor 3 subunit J
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