3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
GUAGCUUAAAUUAUCAAAGCAAGGCACUGAAAAUGCCUAGAUG*CUCC
Length
47 nucleotides
Bulged bases
7A5G|1|24|A|16, 7A5G|1|24|U|17, 7A5G|1|24|U|18, 7A5G|1|24|A|45
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7A5G|1|24|G|7
7A5G|1|24|U|8
7A5G|1|24|A|9
7A5G|1|24|G|10
7A5G|1|24|C|11
7A5G|1|24|U|12
7A5G|1|24|U|13
7A5G|1|24|A|14
7A5G|1|24|A|15
7A5G|1|24|A|16
7A5G|1|24|U|17
7A5G|1|24|U|18
7A5G|1|24|A|19
7A5G|1|24|U|20
7A5G|1|24|C|21
7A5G|1|24|A|22
7A5G|1|24|A|23
7A5G|1|24|A|24
7A5G|1|24|G|25
7A5G|1|24|C|26
7A5G|1|24|A|27
7A5G|1|24|A|28
7A5G|1|24|G|29
7A5G|1|24|G|30
7A5G|1|24|C|31
7A5G|1|24|A|32
7A5G|1|24|C|33
7A5G|1|24|U|34
7A5G|1|24|G|35
7A5G|1|24|A|36
7A5G|1|24|A|37
7A5G|1|24|A|38
7A5G|1|24|A|39
7A5G|1|24|U|40
7A5G|1|24|G|41
7A5G|1|24|C|42
7A5G|1|24|C|43
7A5G|1|24|U|44
7A5G|1|24|A|45
7A5G|1|24|G|46
7A5G|1|24|A|47
7A5G|1|24|U|48
7A5G|1|24|G|49
*
7A5G|1|24|C|60
7A5G|1|24|U|61
7A5G|1|24|C|62
7A5G|1|24|C|63

Current chains

Chain 24
P tRNA

Nearby chains

Chain A
39S ribosomal protein L40, mitochondrial
Chain A3
Large subunit ribosomal RNA; LSU rRNA
Chain A6
Small subunit ribosomal RNA; SSU rRNA
Chain C
Transfer RNA; tRNA
Chain G6
28S ribosomal protein S9, mitochondrial
Chain N3
39S ribosomal protein L16, mitochondrial
Chain W3
39S ribosomal protein L27, mitochondrial
Chain i4
mRNA

Coloring options:

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