IL_7A5G_056

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

AA*UAU

Length

5 nucleotides

Bulged bases

7A5G|1|A6|A|864

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_056 not in the Motif Atlas

Homologous match to IL_5J7L_002

Geometric discrepancy: 0.218

The information below is about IL_5J7L_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

7A5G|1|A6|A|689
7A5G|1|A6|A|690
*
7A5G|1|A6|U|863
7A5G|1|A6|A|864
7A5G|1|A6|U|865

Current chains

Chain A6

12S rRNA

Nearby chains

Chain M6

28S ribosomal protein S16, mitochondrial

Chain T6

28S ribosomal protein S25, mitochondrial

Chain Z

Elongation factor Tu, mitochondrial