3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
CUA*UG
Length
5 nucleotides
Bulged bases
7A5G|1|A6|U|1025
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7A5G_074 not in the Motif Atlas
Geometric match to IL_3WBM_004
Geometric discrepancy: 0.316
The information below is about IL_3WBM_004
Detailed Annotation
Other IL
Broad Annotation
Other IL
Motif group
IL_18188.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
2

Unit IDs

7A5G|1|A6|C|1024
7A5G|1|A6|U|1025
7A5G|1|A6|A|1026
*
7A5G|1|A6|U|1033
7A5G|1|A6|G|1034

Current chains

Chain A6
12S rRNA

Nearby chains

Chain E6
28S ribosomal protein S6, mitochondrial
Chain P6
28S ribosomal protein S18c, mitochondrial
Chain Q6
28S ribosomal protein S21, mitochondrial
Chain c6
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Coloring options:


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