IL_7A5G_084

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

CCU*AG

Length

5 nucleotides

Bulged bases

7A5G|1|A6|C|1258

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_084 not in the Motif Atlas

Homologous match to IL_4LFB_042

Geometric discrepancy: 0.1711

The information below is about IL_4LFB_042

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

149

Unit IDs

7A5G|1|A6|C|1257
7A5G|1|A6|C|1258
7A5G|1|A6|U|1259
*
7A5G|1|A6|A|1342
7A5G|1|A6|G|1343

Current chains

Chain A6

12S rRNA

Nearby chains

Chain K6

28S ribosomal protein S14, mitochondrial

Chain Z6

28S ribosomal protein S33, mitochondrial