3D structure

PDB id
7A5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CC*GCG
Length
5 nucleotides
Bulged bases
7A5H|1|A|C|1769
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7A5H_002 not in the Motif Atlas
Homologous match to IL_7RQB_002
Geometric discrepancy: 0.1149
The information below is about IL_7RQB_002
Detailed Annotation
Single bulged A
Broad Annotation
No text annotation
Motif group
IL_37497.6
Basepair signature
cWW-L-cWW
Number of instances in this motif group
118

Unit IDs

7A5H|1|A|C|1682
7A5H|1|A|C|1683
*
7A5H|1|A|G|1768
7A5H|1|A|C|1769
7A5H|1|A|G|1770

Current chains

Chain A
16S rRNA

Nearby chains

Chain F
39S ribosomal protein L4, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain X
39S ribosomal protein L28, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:


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