3D structure

PDB id
7A5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GCAA*UAC
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7A5H_041 not in the Motif Atlas
Homologous match to IL_7RQB_093
Geometric discrepancy: 0.1655
The information below is about IL_7RQB_093
Detailed Annotation
Major groove platform with extra pair
Broad Annotation
Major groove platform
Motif group
IL_63450.2
Basepair signature
cWW-cWW-cSH-cWW
Number of instances in this motif group
8

Unit IDs

7A5H|1|A|G|2943
7A5H|1|A|C|2944
7A5H|1|A|A|2945
7A5H|1|A|A|2946
*
7A5H|1|A|U|2980
7A5H|1|A|A|2981
7A5H|1|A|C|2982

Current chains

Chain A
16S rRNA

Nearby chains

Chain C
Probable peptide chain release factor C12orf65, mitochondrial
Chain I
39S ribosomal protein L10, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain o
Ribosomal protein 63, mitochondrial

Coloring options:


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