3D structure

PDB id
7A5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CCCUGUAC*GGACAAG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7A5H_051 not in the Motif Atlas
Geometric match to IL_7RQB_006
Geometric discrepancy: 0.3012
The information below is about IL_7RQB_006
Detailed Annotation
8x7 Sarcin-Ricin; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_04346.7
Basepair signature
cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
Number of instances in this motif group
15

Unit IDs

7A5H|1|A|C|3119
7A5H|1|A|C|3120
7A5H|1|A|C|3121
7A5H|1|A|U|3122
7A5H|1|A|G|3123
7A5H|1|A|U|3124
7A5H|1|A|A|3125
7A5H|1|A|C|3126
*
7A5H|1|A|G|3131
7A5H|1|A|G|3132
7A5H|1|A|A|3133
7A5H|1|A|C|3134
7A5H|1|A|A|3135
7A5H|1|A|A|3136
7A5H|1|A|G|3137

Current chains

Chain A
16S rRNA

Nearby chains

Chain L
39S ribosomal protein L14, mitochondrial
Chain u
Mitochondrial assembly of ribosomal large subunit protein 1

Coloring options:


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