IL_7A5I_033

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

7A5I|1|A3|C|2718, 7A5I|1|A3|U|3100, 7A5I|1|A3|A|3101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5I_033 not in the Motif Atlas

Homologous match to IL_5J7L_321

Geometric discrepancy: 0.088

The information below is about IL_5J7L_321

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

7A5I|1|A3|A|2717
7A5I|1|A3|C|2718
7A5I|1|A3|G|2719
*
7A5I|1|A3|C|3099
7A5I|1|A3|U|3100
7A5I|1|A3|A|3101
7A5I|1|A3|U|3102

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 03

39S ribosomal protein L32, mitochondrial

Chain E3

39S ribosomal protein L3, mitochondrial

Chain T3

39S ribosomal protein L22, mitochondrial