IL_7A5I_042
3D structure
- PDB id
- 7A5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- 7A5I|1|A3|U|2978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A5I_042 not in the Motif Atlas
- Geometric match to IL_4WF9_092
- Geometric discrepancy: 0.1762
- The information below is about IL_4WF9_092
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_36931.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
7A5I|1|A3|A|2946
7A5I|1|A3|U|2947
7A5I|1|A3|C|2948
*
7A5I|1|A3|G|2976
7A5I|1|A3|G|2977
7A5I|1|A3|U|2978
7A5I|1|A3|U|2979
7A5I|1|A3|U|2980
Current chains
- Chain A3
- 16S rRNA
Nearby chains
- Chain I3
- 39S ribosomal protein L10, mitochondrial
- Chain N3
- 39S ribosomal protein L16, mitochondrial
- Chain X
- Transfer RNA; tRNA
- Chain o3
- Ribosomal protein 63, mitochondrial
Coloring options: