IL_7A5I_044

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UAG*CA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5I_044 not in the Motif Atlas

Geometric match to IL_4V88_412

Geometric discrepancy: 0.2152

The information below is about IL_4V88_412

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

7A5I|1|A3|U|2955
7A5I|1|A3|A|2956
7A5I|1|A3|G|2957
*
7A5I|1|A3|C|2967
7A5I|1|A3|A|2968

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 43

39S ribosomal protein L36, mitochondrial

Chain N3

39S ribosomal protein L16, mitochondrial

Chain X

Transfer RNA; tRNA

Chain l3

39S ribosomal protein L54, mitochondrial