IL_7A5I_078

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

7A5I|1|A6|A|1482

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5I_078 not in the Motif Atlas

Homologous match to IL_6CZR_147

Geometric discrepancy: 0.1597

The information below is about IL_6CZR_147

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

7A5I|1|A6|G|1179
7A5I|1|A6|G|1180
*
7A5I|1|A6|U|1481
7A5I|1|A6|A|1482
7A5I|1|A6|C|1483

Current chains

Chain A6

12S rRNA

Nearby chains

Chain D6

28S ribosomal protein S5, mitochondrial

Chain d6

Aurora kinase A-interacting protein